fastq_to_fasta
A template for creation of SeqAn3 apps, with a FASTQ to FASTA example app.
one_indirect_error_model.hpp
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1 // --------------------------------------------------------------------------------------------------
2 // Copyright (c) 2006-2022, Knut Reinert & Freie Universität Berlin
3 // Copyright (c) 2016-2022, Knut Reinert & MPI für molekulare Genetik
4 // This file may be used, modified and/or redistributed under the terms of the 3-clause BSD-License
5 // shipped with this file and also available at: https://github.com/seqan/raptor/blob/main/LICENSE.md
6 // --------------------------------------------------------------------------------------------------
7 
8 #pragma once
9 
10 #include <seqan3/search/kmer_index/shape.hpp>
11 
12 namespace raptor::threshold
13 {
14 
15 [[nodiscard]] std::vector<double>
16 one_indirect_error_model(size_t const pattern_size, size_t const window_size, seqan3::shape const shape);
17 
18 } // namespace raptor::threshold
Definition: forward_strand_minimiser.hpp:19
std::vector< double > one_indirect_error_model(size_t const pattern_size, size_t const window_size, seqan3::shape const shape)
Definition: one_indirect_error_model.cpp:17