fastq_to_fasta
A template for creation of SeqAn3 apps, with a FASTQ to FASTA example app.
Class Hierarchy
This inheritance list is sorted roughly, but not completely, alphabetically:
[detail level
1
2
]
C
raptor::logspace::add_fn
C
raptor::bin_validator
C
raptor::build_arguments
C
raptor::hibf::build_data< data_layout_mode >
C
raptor::hibf::chopper_pack_record
C
raptor::hierarchical_interleaved_bloom_filter< data_layout_mode_ >::counting_agent_type< value_t >
Manages counting ranges of values for the hibf::hierarchical_interleaved_bloom_filter
C
raptor::threshold::forward_strand_minimiser
C
raptor::hierarchical_interleaved_bloom_filter< data_layout_mode_ >
The HIBF binning directory. A data structure that efficiently answers set-membership queries for multiple bins
C
raptor::hierarchical_interleaved_bloom_filter< data_layout_mode >
C
raptor::index_factory< compressed >
C
raptor::hierarchical_interleaved_bloom_filter< data_layout_mode_ >::membership_agent
Manages membership queries for the hibf::hierarchical_interleaved_bloom_filter
C
raptor::hibf::node_data
C
raptor::pattern_size
C
raptor::positive_integer_validator
C
raptor::power_of_two_validator
C
raptor::raptor_index< data_t >
C
raptor::search_arguments
▼
C
seqan3::sequence_file_input_default_traits_dna
C
raptor::dna4_traits
C
raptor::size_validator
C
raptor::sync_out
C
raptor::threshold::threshold
C
raptor::threshold::threshold_parameters
C
raptor::upgrade_arguments
C
raptor::hierarchical_interleaved_bloom_filter< data_layout_mode_ >::user_bins
Bookkeeping for user and technical bins
C
raptor::window
Strong type for passing the window size
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