fastq_to_fasta
A template for creation of SeqAn3 apps, with a FASTQ to FASTA example app.
Typedefs | Variables
raptor::index_structure Namespace Reference

Typedefs

using ibf = seqan3::interleaved_bloom_filter< seqan3::data_layout::uncompressed >
 
using ibf_compressed = seqan3::interleaved_bloom_filter< seqan3::data_layout::compressed >
 
using hibf = hierarchical_interleaved_bloom_filter< seqan3::data_layout::uncompressed >
 
using hibf_compressed = hierarchical_interleaved_bloom_filter< seqan3::data_layout::compressed >
 

Variables

template<typename return_t , typename input_t >
concept compressible_from
 

Typedef Documentation

◆ hibf

using raptor::index_structure::hibf = typedef hierarchical_interleaved_bloom_filter<seqan3::data_layout::uncompressed>

◆ hibf_compressed

using raptor::index_structure::hibf_compressed = typedef hierarchical_interleaved_bloom_filter<seqan3::data_layout::compressed>

◆ ibf

using raptor::index_structure::ibf = typedef seqan3::interleaved_bloom_filter<seqan3::data_layout::uncompressed>

◆ ibf_compressed

using raptor::index_structure::ibf_compressed = typedef seqan3::interleaved_bloom_filter<seqan3::data_layout::compressed>

Variable Documentation

◆ compressible_from

template<typename return_t , typename input_t >
concept raptor::index_structure::compressible_from
Initial value:
= (std::same_as<return_t, ibf_compressed> && std::same_as<input_t, ibf>)
|| (std::same_as<return_t, hibf_compressed> && std::same_as<input_t, hibf>)